Le Sy Vinh

Personal information

Office: Department of Computer Science

     University of Engineering and Technology

      Vietnam National University, Hanoi

             306-E3, 144 Xuan Thuy, Cau Giay, Hanoi

Phone: 04 37547812

Email: vinhls@vnu.edu.vn; vinhbio@gmail.com

 

 Teaching

·         Data structures and algorithms

·         Advanced programming languages

·         Bioinformatics

·         Advanced topics in Computer Sciences

 

Reseaches

·         Bioinformatics

·         Natural Languages processing

·         Social networks

 

Projects:

·         Bioinformatics tools and applications (granted by Ministry of Science and Technology)

·         Amino acid substitution modeling (granted by Nafosted)

·         Trends analysis (granted by Ministry of Science and Technology)

 

Publications:

1.       Dang Cao Cuong, Vincent Lefort, Le Sy Vinh, Le Si Quang, Olivier Gascuel, ReplacementMatrix: a Web Server for Maximum Likelihood Estimation of Amino Acid Replacement Rate Matrices, Bioinformatics, 2011 (ISI).

2.       FLU, an amino acid substitution model for influenza proteins, Cuong Cao Dang, Quang Si Le, Olivier Gascuel and Vinh Sy Le,  BMC Evolutionary Biology 2011, 10:99 (ISI).

  1. Le Sy Vinh, Andrea Fuehrer, Arndt von Haeseler, Random tree puzzle leads to Yule Harding distribution, Molecular Biology and Evolution, 28:873-877, 2010 (ISI).
  2. Dang Cao Cuong, Le Sy Vinh,  Olivier Gascuel, Le Si Quang, Flu, an amino acid substitution model for Influenza proteins, BME Evolutionary Biology, 10:99, 2010 (ISI).
  3. Andres Varon, Le Sy Vinh, Ward Wheeler, POY version 4: phylogenetic analysis using dynamic homologies, Cladistics, 26:72-85, 2010 (ISI).
  4. Michael Tillich, Vinh Le Sy, Katrin Schulerowitz, Arndt von Haeseler, Uwe G Maier and Christian Schmitz-Linneweber, Frequent Losses and a Rare Gain of Chloroplast RNA Editing Sites in Seed Plants, BME Evolutionary Biology, 9:210, 2009 (ISI).
  5. Le Sy Vinh, Arndt von Haeseler, Bookreview on “Computational Molecular Biology by Ziheng Yang Oxford University Press, Oxford, Systematic Biology, 56:1024-1026, 2007 (ISI).
  6. Bui Quang Minh, Le Sy Vinh, Arndt von Haeseler, pIQPNNI-Parallel reconstruction of large maximum likelihood phylogenies, Bioinformatics, 21:3794-3796 (ISI).
  7. Le Sy Vinh, Arndt von Haeseler, Shortest triplet clustering: reconstructing large phylogenies using representative sets, BMC Bioinformatics, 6:92, 2005 (ISI).
  8. Le Sy Vinh, Arndt von Haeseler, IQPNNI: moving fast through tree space and stopping in time,  Molecular Biology and Evolution, 21:1565-1571, 2004 (ISI).